Before Part I
- Madara Uchiha - Died in battle with Hashirama. Later revived by Edo Tensei.
- Hashirama Senju - Unknown cause of death. Later revived by Edo Tensei.
- Tobirama Senju - Killed by the Gold and Silver brothers. Later revived by Edo Tensei.
- Sakumo Hatake - Kills himself after being slurred at.
- Rin Nohara - Sacrifices herself to be killed by Kakashi after having a Tailed Beast put in her.
- Kushina Uzumaki - Killed by the Nine Tailed Fox.
- Minato Namikaze - Died after using Reaper Death Seal to seal the fox in Naruto.
- Shisui Uchiha - Commits suicide by leaping off a cliff.
- Entire Uchiha clan (except for Sasuke, Itachi, and Obito) - Killed by Itachi.
- Kaiza - Publically executed by Gatō.
- Yahiko - Threw himself into Nagato's kunai.
Part I Edit
- Haku - Killed by Kakashi's Lighting Cutter while protecting Zabuza.
- Gatō - Falls off a bridge after getting slashed repeatedly by Zabuza with a kunai.
- Zabuza Momochi - Dies from his injuries after his fight with Kakashi Hatake
- Hayate Gekko - Killed by Baki's Blade of Wind.
- Hiruzen Sarutobi (Third Hokage) - Died using Reaper Death Seal on Orochimaru.
- Jirōbō - Killed by Chōji.
- Kidōmaru - Killed by Neji.
- Tayuya - Killed by Temari.
- Sakon - Killed by Kankuro.
- Ukon - Killed by Kankuro.
- Kimimaro - Succumbs to his illness while attempting to kill Gaara.
Part II Edit
- Gaara - The One-tails was taken out of him he was later revived by Chiyo
- Sasori - Core destroyed by Chiyo's puppets.
- Chiyo - Sacrificed her life force to bring Gaara back to life.
- Asuma - Killed by Hidan.
- Hidan - Killed by Shikamaru
- Kakuzu - Killed by Kakashi and Naruto.
- Deidara - Blew himself up with C4 to try to kill Sasuke.
- Jiraiya - Killed by Pain.
- Itachi Uchiha - Died while fighting Sasuke.(reanimated by kabuto)
- Kakashi Hatake - Used up all his Chakra protecting Choji from Pain. Later revived by Rinne Rebirth.
- Shizune - Killed by Pain after reading her mind to track down Naruto. Later revived by Rinne Rebirth.
- Nagato - Sacrificed himself.
- Garo - killed by Kawaki
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